BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB005F09LP1|AL425408
(958 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1800 1779 0.0
>3x_Contig1800
Length = 38778
Score = 1779 bits (893), Expect = 0.0
Identities = 950/963 (98%), Gaps = 7/963 (0%)
Strand = Plus / Minus
Query: 1 ccttgtaaattattcacagaaaatgttgtcattccaagggacctcccttgcaacctgata 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 34391 ccttgtaaattattcacagaaaatgttgtcattccaagggacctcccttgcaacctgata 34332
Query: 61 aattatttgtaaaaagctttcattgcaagggacctcccttgtaactcgatgggattttta 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 34331 aattatttgtaaaaagctttcattgcaagggacctcccttgtaactcgatgggattttta 34272
Query: 121 gaaactactttcattccaaggggccccccttctaatcttgctagatgtttctatttcgtg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 34271 gaaactactttcattccaaggggccccccttctaatcttgctagatgtttctatttcgtg 34212
Query: 181 gagatggtcatgcatatatatttatatatatttctcgattgggtgtyctctgagtgaaat 240
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 34211 gagatggtcatgcatatatatttatatatatttctcgattgggtgtcctctgagtgaaat 34152
Query: 241 cgccatcaaaccggtagggaataattcccctggatccttcaaatgttgttcggataaaga 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 34151 cgccatcaaaccggtagggaataattcccctggatccttcaaatgttgttcggataaaga 34092
Query: 301 aaaatcctatgatcctcgcctcataattctttatttattaggtttcctatgttaatagta 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 34091 aaaatcctatgatcctcgcctcataattctttatttattaggtttcctatgttaatagta 34032
Query: 361 taagtttggtctttacgtacgtttctacttgtcttcttgtggatttcatttcacaaggta 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 34031 taagtttggtctttacgtacgtttctacttgtcttcttgtggatttcatttcacaaggta 33972
Query: 421 tcatgaatactgatggaaccatcctttagctcatagaacaacctttcagccaccttctga 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 33971 tcatgaatactgatggaaccatcctttagctcatagaacaacctttcagccaccttctga 33912
Query: 481 gaagctatttcttcaccgacgtattcatcatcgaaga-gttcttgatgtttctgtctttt 539
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 33911 gaagctatttcttcaccgacgtattcatcatcgaagatgttcttgatgtttctgtctttt 33852
Query: 540 ggtaatagcgtgtggttttctctgacgaactctgcgaattctccgttcaaatagacatgg 599
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 33851 ggtaatagcgtgtggttttctctgacgaactctgcgaattctccgttcaaatagacatgg 33792
Query: 600 actaacagattcgatcctctcacctgttttctttctttcgcccacgcctctctttcttct 659
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 33791 actaacagattcgatcctctcacctgttttctttctttcgcccacgcctctctttcttct 33732
Query: 660 aaggagggtagttgggatttccctgtccagacagcggcaatgatagatgaagcgacttcg 719
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 33731 aaggagggtagttgggatttccctgtccagacagcggcaatgatagatgaagcgacttcg 33672
Query: 720 aatgagggccatttgaactgtgtkgtcaacacaccaacaaaggctaaagacaaatccttt 779
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 33671 aatgagggccatttgaactgtgtggtcaacacaccaacaaaggctaaagacaaatccttt 33612
Query: 780 actgaaaammtactcttgtaaataccagtmactagggagttgttgtttgkgaactttacc 839
|||||||| ||||||||||||||||||| ||||||||||||||||||| ||||||||||
Sbjct: 33611 actgaaaaaatactcttgtaaataccagtaactagggagttgttgtttg-gaactttacc 33553
Query: 840 ctcttcctcgtcagccccaacagagataccggtatctttctcattcaagaatgggtagtg 899
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 33552 ctcttcctcgtcagctccaacagagataccggtatctttctcattcaagaatgggtagtg 33493
Query: 900 -caatgataa-ctgtcgag-aaacaatgatatc-acatcttcaatcttggt-ccgtcaac 954
||||||||| |||||||| ||||||||||||| ||||||||||||||||| ||||||||
Sbjct: 33492 ccaatgataacctgtcgagaaaacaatgatatcaacatcttcaatcttggtcccgtcaac 33433
Query: 955 gaa 957
|||
Sbjct: 33432 gaa 33430
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.712 1.31
Gapped
Lambda K H
1.38 0.712 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7506
Number of Sequences: 1807
Number of extensions: 7506
Number of successful extensions: 114
Number of sequences better than 1.0e-20: 1
length of query: 958
length of database: 10,358,551
effective HSP length: 16
effective length of query: 942
effective length of database: 10,329,639
effective search space: 9730519938
effective search space used: 9730519938
T: 0
A: 40
X1: 6 (12.0 bits)
X2: 15 (29.9 bits)
S1: 12 (24.4 bits)
S2: 50 (100.1 bits)